PFKFB3 is a
gene that encodes the 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3enzyme in humans.[5][6][7] It is one of 4 tissue-specific PFKFB isoenzymes identified currently (PFKFB1-4).[8]
Gene
The PFKFB3 gene is mapped to single locus on chromosome 10 (10p15-p14).[5][6] It spans a region of 32.5kb with an
open reading frame that is 5,675bp long. It is estimated to consist of 19 exons, of which 15 are regularly expressed.[8] Alternative splicing of the variable, COOH-terminal domain has been observed, leading to 6 different isoforms termed UBI2K1 to UBI2K6 in humans.[9] Different nomenclature also recognizes two broad categories of PFKFB3 isoforms, termed ‘inducible’ and ‘ubiquitous’.[10] The inducible protein isoform, iPFK2, is named as such because its expression has been shown to be induced by hypoxic conditions.
The PFKFB3 promoter is predicted to contain multiple binding sites, including Sp-1 and AP-2 binding sites. It also contains motifs for the binding of E-box, nuclear factor-1 (NF-1), and progesterone response element. Expression of the promoter is shown to be induce by phorbol esters and cyclic-AMP-dependent protein kinase signaling.[10]
Structure
The four PFKFB isoforms share high (85%) ‘2-Kase/2-Pase core’ sequence homology, but have different properties based on variable N- and C- terminal regulatory domains and variation in residues surrounding the active sites.[11] The PFKFB3 inducible isoform has higher ‘2-Kase’ (kinase) activity than other isoforms, due to phosphorylation of Ser-460 by PKA or AMP-dependent protein kinase.[11] The high ‘2-Kase’ activity of PFKFB3 is also due to the lack of a specific Ser that is phosphorylated in the other PFKFB isoforms to decrease kinase activity.[12]
The primary protein encoded by PFKFB3, iPFK2, consists of 590 amino acids. It has a predicted molecular weight of 66.9 kDa and an isoelectric point of 8.64.[8] The crystal structure was determined in 2006:[11]
Researcher found that iPFK2 has a beta-hairpin N-terminal structure that secures the binding of fructose-6-phosphate to the active site via interaction with the protein's ‘2-Pase’ domain. There are two active pockets within iPFK2 for fructose-2,6-bisphosphatase and 6-phosphofructo-2-kinase which are structurally different. The F-2,6-BP active site structurally open, while the active pocket of 6-phosphofructo-2-kinase is more rigid. This rigidity permits the independent binding of F-6-P and ATP with increased affinity than other isoforms.
Function
iPFK2 converts fructose-6-phosphate to fructose-2,6-bisP (F2,6BP). F2,6BP is a ‘potent’ allosteric activator of 6-phosphofructokinase-1 (PFK-1), stimulating glycolysis. Click to see
image of PFFKB3 function[permanent dead link].
Role in neuronal excitotoxicity
In neurons, glucose metabolism via glycolysis is usually low when compared to astrocytes. According Astrocyte-to-Neuron Lactate Shuttle Hypothesis, glucose uptake by the brain parenchyma occurs predominantly into astrocytes which subsequently release lactate for the use of neurons.[13] In neurons, glucose is mainly metabolized through the pentose–phosphate pathway (PPP), which is required for NADPH(H+) regeneration and maintenance of neuronal redox status. This neuronal metabolic switch is dictated by the PFKFB3 activity. In neurons, PFKFB3 protein abundance is negligible due to the continuous proteasomal degradation of the enzyme.[14]
However, overexcitation of N-methyl-D-aspartate subtype of glutamate receptors (NMDAR), known as excitotoxicity, stabilizes PFKFB3 protein in neurons, resulting in a redirection of glucose flux from PPP to glycolysis, followed by low NADPH(H+) availability for proper GSH regeneration; this ultimately leads to oxidative stress and neuronal death. Silencing of PFKFB3 with small interfering RNA in neurons in vitro prevents the increase in ROS and apoptotic death induced by excitotoxic stimulus.[15] Pharmacological inhibition of PFKFB3 in vitro also protects neurons from apoptosis induced by NMDAR overexcitation as well as from amyloid-ß peptide-induced
neurotoxicity. When used in vivo in a mouse model of ischaemic stroke, PFKFB3 inhibitor alleviates motor discoordination and brain infarct injury [16]
Cancer Connections
Warburg Effect
The
Warburg effect, proposed by Otto Warbug in 1956,[17] describes the upregulation of glycolysis in most cancer cells, even in the presence of oxygen. The high rate of glycolysis is accompanied by increased lactic acid fermentation, providing additional nutrients for cancer cell growth and tumorigenesis.
PFKFB3 is associated with the Warburg effect because its activity increases the rate of glycolysis. PFKFB3 has been found to be upregulated in numerous cancers, including colon, breast, ovarian, and thyroid.[18] Reduced methylation of PFKFB3 is also found in some cancers, triggering the shift to the glycolytic pathway that supports cancerous growth.[19]
Hypoxia Signaling Pathway
PFKFB3 expression is induced by hypoxia.[20] The promoter of PFKFB3 contains binding sites, called hypoxia response elements (HREs), that recruit the binding of
hypoxia-inducible factor-1 (HIF-1).[21]
Hypoxia signaling via HIF-1α stabilization upregulates the transcription of genes that permit survival in low oxygen conditions. These genes include glycolysis enzymes, like PFKFB3, that permit ATP synthesis without oxygen, and vascular endothelial growth factor (VEGF), which promotes angiogenesis.
Cell Cycle & Apoptosis
It was more recently discovered that PFKFB3 promotes cell cycle progression (cell proliferation) and suppresses apoptosis by regulating
cyclin-dependent kinase 1 (Cdk-1). PFKFB3's synthesis of F2,6BP in the nucleus was found to regulate Cdk-1, whereas cytosolic PFKFB3 activates PFK-1. Nuclear PFKFB3 activates Cdk1 to phosphorylate the Thr-187 site of p27, causing decreased levels of p27.[22][23] Reduced p27 causes protection against apoptosis and progression of cells through the G1/S phase checkpoint These findings established a significant link between PFKFB3 cancer cell survival and proliferation.
Circadian Clock
Circadian clocks dysregulation is associated with many types of cancer.[24] PFKFB3 expression exhibits circadian rhythmicity that is different between cancerous and non-cancerous cells.[25] It was specifically found that the circadian-driven transcription factor ‘
CLOCK’ binds to the PFKFB3 promoter at a genuine ‘E-box’ site to increase transcription in cancer cells.
Inhibition of PFKFB3 using 3PO was successful in reducing cancer growth and increasing apoptosis, but only at certain time points within the circadian cycle. This finding highlights the need for time-based PFKFB3 inhibition in cancer treatment. The role of PFKFB3 inhibition in this process should now be considered taking recent information into account that 3PO was shown not to be a PFKFB3 inhibitor (3PO was inactive in a kinase PFKFB3 inhibition assay (IC50 > 100 μM)) [26] (see the corresponding discussion in
§ Small molecule inhibitors of PFKFB3)
Additional Cancer Connections
PFKFB3 is activated by
progestins in breast cancer cells[27]
Silencing of PFKFB3 impairs angiogenesis. PFKFB3-driven glycolysis overrules the pro-stalk activity of Notch. PFKFB3 regulates tip and stalk cell behavior and compartmentalizes with F-actin.[28]
Anti-cancer Therapeutic Strategy
Inhibition of PFKFB3 is being analyzed as a potential anti-cancer therapy. The most notable example is clinical trial by Advanced Cancer Therapeutics (ACT) with PFK158, an improved version of 3PO, a PFKFB3 inhibitor.[29] It appears, however, that further development has been discontinued following disappointing Phase I results (see also the discussion of ACT compounds in
§ Small molecule inhibitors of PFKFB3).[30]
Small molecule inhibitors of PFKFB3
Several small-molecule inhibitors of PFKFB3 are currently in development.
For a long time a small molecule 3-(3-pyridinyl)-1-(4-pyridinyl)-2-propen-1-one (3PO) was believed to be an inhibitor of PFKFB3 and used as PFKFB3 inhibitor in many scientific publications. 3PO decreases glucose uptake and increases autophagy.[31] Research is currently exploring various 3PO derivatives (i.e. PFKF15)[32] in an effort to increase their efficacy as anti-cancer therapies, but the data on 3PO derivatives being actually PFKFB3 inhibitors are also unavailable.
Recent research of one of the leading pharmaceuticals companies
AstraZeneca and CRT Discovery Laboratories of world's largest independent cancer research charity
Cancer Research UK showed that 3PO was inactive in a kinase PFKFB3 inhibition assay (IC50 > 100 μM).[26] The crystal structures of 3PO, as well as its analogues PFK15 and PFK158, with the PFKFB3 enzyme are also not available. The findings of
AstraZeneca and Cancer Research UK regarding to 3PO remain unchallenged neither by 3PO developers since April 7, 2015.
The efficacy of two known PFKFB3 inhibitors, namely AZ67 (from
AstraZeneca and CRT Discovery Laboratories [26]), and PFK158, an improved but structurally close derivative of 3PO, were recently investigated for their ability to reduce F2,6BP production in A549 cells. Both compounds (AZ67 and PFK158) were able to reduce the cellular levels of F2,6BP in a dose-dependent manner, with IC50 of 0.51 μM and 5.90 μM, respectively. To see if the reduction of cellular F2,6BP levels was a result of direct PFKFB3 inhibition, both compounds were tried in the enzymatic cell-free assay. The study revealed that AZ67 inhibited the enzymatic activity of PFKFB3 with an IC50 of 0.018 μM, a value that is in accordance with previously published results. However, PFK158 had no effect on PFKFB3 enzymatic activity at any of the concentrations tested (up to 100 μM). Accordingly, although PFK158 is able to decrease F2,6BP and glycolytic flux, the experiments show that these effects are not due to PFKFB3 enzymatic inhibition.[16]
Together, these findings put into question the range of scientific research and publications where 3PO and its derivatives (such as PFKF158) was used as a PFKFB3 inhibitor.
In 2018
Kancera reported development and characterization of KAN0438241 (and its pro-drug KAN0438757) as a potent and highly selective PFKFB3 inhibitor and a radiosensitizer.[33]
Other pathways involving PFKFB3
Autophagy
Enhanced activity of PFKFB3 accelerates ROS production as an end product of glycolysis, and thus increases autophagy. Likewise, inhibition of PFKFB3 has been found to induce autophagy.[34][35]
Autophagy can prolong cellular survival during low energy conditions. This finding was discovered in relation to rheumatoid arthritis.[36] It was found that RA T cell fail to upregulate autophagy, and knockout experiments placed PFKFB3 as an upstream regulator of this process.
Insulin Signaling Pathway
PFKFB3 was identified in a kinome screen as a regulator of insulin/IGF-1. Suppression of PFKFB3 was found to decrease insulin-stimulated glucose uptake, GLUT4 translocation, and Akt signaling in 3T3-L1 adipocytes. Overexpression caused the insulin-dependent phosphorylation of Akt and Akt substrates.[37]
PFKFB3 expression increases in fat tissues during
adipogenesis, but prolonged insulin exposure has been shown to decrease the expression of PFKFB3. This is thought to occur due to a negative feedback mechanism involving insulin.[38]
p38/MK2 Stress Signaling Pathway
p38 MAPK have been found to increase PFKFB3 activity through (1) the transcriptional activation of PFKFB3 in response to stress stimuli and (2) the post-translational phosphorylation of iPFK2 at Ser-461.[39][40]
^"Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^"Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^
abNicholl J, Hamilton JA,
Sutherland GR, Sutherland RL, Watts CK (April 1997). "The third human isoform of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase (PFKFB3) map position 10p14-p15". Chromosome Research. 5 (2): 150.
doi:
10.1023/A:1018482511456.
PMID9146922.
S2CID34088792.
^
abManzano A, Rosa JL, Ventura F, Pérez JX, Nadal M, Estivill X, et al. (Mar 1999). "Molecular cloning, expression, and chromosomal localization of a ubiquitously expressed human 6-phosphofructo-2-kinase/ fructose-2, 6-bisphosphatase gene (PFKFB3)". Cytogenetics and Cell Genetics. 83 (3–4): 214–7.
doi:
10.1159/000015181.
PMID10072580.
S2CID23221556.
^
abcMahlknecht U, Chesney J, Hoelzer D, Bucala R (October 2003). "Cloning and chromosomal characterization of the 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-3 gene (PFKFB3, iPFK2)". International Journal of Oncology. 23 (4): 883–91.
doi:
10.3892/ijo.23.4.883.
PMID12963966.
^Kessler R, Eschrich K (March 2001). "Splice isoforms of ubiquitous 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase in human brain". Brain Research. Molecular Brain Research. 87 (2): 190–5.
doi:
10.1016/s0169-328x(01)00014-6.
PMID11245921.
^
abNavarro-Sabaté A, Manzano A, Riera L, Rosa JL, Ventura F, Bartrons R (February 2001). "The human ubiquitous 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase gene (PFKFB3): promoter characterization and genomic structure". Gene. 264 (1): 131–8.
doi:
10.1016/S0378-1119(00)00591-6.
PMID11245987.
^Sakakibara R, Kato M, Okamura N, Nakagawa T, Komada Y, Tominaga N, et al. (July 1997). "Characterization of a human placental fructose-6-phosphate, 2-kinase/fructose-2,6-bisphosphatase". Journal of Biochemistry. 122 (1): 122–8.
doi:
10.1093/oxfordjournals.jbchem.a021719.
PMID9276680.
^Magistretti PJ, Sorg O, Yu N, Martin JL, Pellerin L (1993). "Neurotransmitters regulate energy metabolism in astrocytes: implications for the metabolic trafficking between neural cells". Dev Neurosci. 15 (3–51): 306–12.
doi:
10.1159/000111349.
PMID7805583.
^Herrero-Mendez A, Almeida A, Fernández E, Maestre C, Moncada S, Bolaños JP (June 2009). "The bioenergetic and antioxidant status of neurons is controlled by continuous degradation of a key glycolytic enzyme by APC/C-Cdh1". Nat Cell Biol. 11 (6): 747–52.
doi:
10.1038/ncb1881.
PMID19448625.
S2CID19519317.
^
abcBoyd S, Brookfield JL, Critchlow SE, Cumming IA, Curtis NJ, Debreczeni J, et al. (April 2015). "Structure-Based Design of Potent and Selective Inhibitors of the Metabolic Kinase PFKFB3". Journal of Medicinal Chemistry. 58 (8): 3611–25.
doi:
10.1021/acs.jmedchem.5b00352.
PMID25849762.
^Novellasdemunt L, Obach M, Millán-Ariño L, Manzano A, Ventura F, Rosa JL, et al. (March 2012). "Progestins activate 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 (PFKFB3) in breast cancer cells". The Biochemical Journal. 442 (2): 345–56.
doi:
10.1042/BJ20111418.
hdl:10261/87967.
PMID22115192.
^Novellasdemunt L, Bultot L, Manzano A, Ventura F, Rosa JL, Vertommen D, et al. (June 2013). "PFKFB3 activation in cancer cells by the p38/MK2 pathway in response to stress stimuli". The Biochemical Journal. 452 (3): 531–43.
doi:
10.1042/bj20121886.
PMID23548149.
^Bolaños JP (June 2013). "Adapting glycolysis to cancer cell proliferation: the MAPK pathway focuses on PFKFB3". The Biochemical Journal. 452 (3): e7-9.
doi:
10.1042/bj20130560.
PMID23725459.
Further reading
Sakai A, Kato M, Fukasawa M, Ishiguro M, Furuya E, Sakakibara R (March 1996). "Cloning of cDNA encoding for a novel isozyme of fructose 6-phosphate, 2-kinase/fructose 2,6-bisphosphatase from human placenta". Journal of Biochemistry. 119 (3): 506–11.
doi:
10.1093/oxfordjournals.jbchem.a021270.
PMID8830046.
Sakakibara R, Kato M, Okamura N, Nakagawa T, Komada Y, Tominaga N, et al. (July 1997). "Characterization of a human placental fructose-6-phosphate, 2-kinase/fructose-2,6-bisphosphatase". Journal of Biochemistry. 122 (1): 122–8.
doi:
10.1093/oxfordjournals.jbchem.a021719.
PMID9276680.
Fukasawa M, Takayama E, Shinomiya N, Okumura A, Rokutanda M, Yamamoto N, Sakakibara R (January 2000). "Identification of the promoter region of human placental 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase gene". Biochemical and Biophysical Research Communications. 267 (3): 703–8.
doi:
10.1006/bbrc.1999.2022.
PMID10673355.
Kessler R, Eschrich K (March 2001). "Splice isoforms of ubiquitous 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase in human brain". Brain Research. Molecular Brain Research. 87 (2): 190–5.
doi:
10.1016/S0169-328X(01)00014-6.
PMID11245921.
Riera L, Obach M, Navarro-Sabaté A, Duran J, Perales JC, Viñals F, et al. (August 2003). "Regulation of ubiquitous 6-phosphofructo-2-kinase by the ubiquitin-proteasome proteolytic pathway during myogenic C2C12 cell differentiation". FEBS Letters. 550 (1–3): 23–9.
doi:
10.1016/S0014-5793(03)00808-1.
PMID12935880.
S2CID41726316.
Manes NP, El-Maghrabi MR (June 2005). "The kinase activity of human brain 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase is regulated via inhibition by phosphoenolpyruvate". Archives of Biochemistry and Biophysics. 438 (2): 125–36.
doi:
10.1016/j.abb.2005.04.011.
PMID15896703.
Minchenko OH, Ogura T, Opentanova IL, Minchenko DO, Esumi H (December 2005). "Splice isoform of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-4: expression and hypoxic regulation". Molecular and Cellular Biochemistry. 280 (1–2): 227–34.
doi:
10.1007/s11010-005-8009-6.
PMID16311927.
S2CID23500518.