Enzyme
|
PDB code
|
Source
|
Recognition sequence
|
Cut
|
Isoschizomers
|
EacI
|
|
Eubacterium acidaminophilum
|
5' GGATC 3' CCTAG
|
5' ---GGATCNNNN N--- 3' 3' ---CCTAGNNNNN --- 5'
|
AclWI, AlwI, BinI,
|
BpuFI,
|
BspPI,
|
BstH9I,
|
Bst31TI, Bth617I, Ral8I
|
|
EaeI
|
|
Enterobacter aerogenes
|
5' YGGCCR 3' RCCGGY
|
5' ---Y GGCCR--- 3' 3' ---RCCGG Y--- 5'
|
|
Eae46I
|
|
Enterobacter aerogenes 46
|
5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
|
EaeAI
|
|
Enterobacter aerogenes
|
5' CCCGGG 3' GGGCCC
|
5' ---C CCGGG--- 3' 3' ---GGGCC C--- 5'
|
AhyI, Cfr9I, EclRI, PaeBI, PspAI, PspALI, XcyI, XmaI, XmaCI
|
EagI
|
|
Enterobacter agglomerans
|
5' CGGCCG 3' GCCGGC
|
5' ---C GGCCG--- 3' 3' ---GCCGG C--- 5'
|
AaaI, BseX3I, BstZI, EclXI, Eco52I, SenPT16I, XmaIII
|
EagBI
|
|
Enterobacter agglomerans CBNU45
|
5' CGATCG 3' GCTAGC
|
5' ---CGAT CG--- 3' 3' ---GC TAGC--- 5'
|
Afa16RI, Afa22MI, BspCI, ErhB9I, NblI, Psu161I, RshI, XorII
|
EagMI
|
|
Enterobacter agglomerans M3
|
5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme18I, BsrAI, Csp68KI, Eco47I, FssI, HgiEI, Kzo49I, SmuEI
|
Eam1104I
|
|
Enterobacter amnigenus RFL1104
|
5' CTCTTC 3' GAGAAG
|
5' ---CTCTTCN NNN--- 3' 3' ---GAGAAGNNNN --- 5'
|
|
Eam1105I
|
|
Enterobacter amnigenus RFL1105
|
5' GACN5GTC 3' CTGN5CAG
|
5' ---GACNNN NNGTC--- 3' 3' ---CTGNN NNNCAG--- 5'
|
AhdI, AspEI,
|
BmeRI,
|
BspOVI,
|
DriI, EclHKI, NruGI
|
|
EarI
|
|
Enterobacter aerogenes
|
5' CTCTTC 3' GAGAAG
|
5' ---CTCTTCN NNN--- 3' 3' ---GAGAAGNNNN --- 5'
|
|
EcaI
|
|
Enterobacter cloacae
|
5' GGTNACC 3' CCANTGG
|
5' ---G GTNACC--- 3' 3' ---CCANTG G--- 5'
|
AcrII, Bse64I, BseT10I, BstEII, Eco91I, EcoO65I, EcoO128I
|
EciI
|
|
Escherichia coli
|
5' GGCGGA 3' CCGCCT
|
5' ---GGCGGAN8NNN --- 3' 3' ---CCGCCTN8N NN--- 5'
|
|
Eci125I
|
|
Escherichia coli VKM-125
|
5' GGTNACC 3' CCANTGG
|
5' ---G GTNACC--- 3' 3' ---CCANTG G--- 5'
|
AcrII, AspAI, BseT10I, BstEII, Eco91I, EcoO65I, EcoO128I
|
EclI
|
|
Enterobacter cloacae
|
5' CAGCTG 3' GTCGAC
|
5' ---CAG CTG--- 3' 3' ---GTC GAC--- 5'
|
|
Ecl136II
|
|
Enterobacter cloacae RFL136
|
5' GAGCTC 3' CTCGAG
|
5' ---GAG CTC--- 3' 3' ---CTC GAG--- 5'
|
|
EclHKI
|
|
Enterobacter cloacae
|
5' GACN5GTC 3' CTGN5CAG
|
5' ---GACNNN NNGTC--- 3' 3' ---CTGNN NNNCAG--- 5'
|
AhdI, AspEI,
|
BmeRI,
|
BspOVI,
|
DriI, Eam1105I, NruGI
|
|
EclRI
|
|
Enterobacter cloacae R
|
5' CCCGGG 3' GGGCCC
|
5' ---C CCGGG--- 3' 3' ---GGGCC C--- 5'
|
AhyI, Cfr9I, EaeAI, Pac25I, PspAI, PspALI, XcyI, XmaI, XmaCI
|
EclXI
|
|
Enterobacter cloacae 590
|
5' CGGCCG 3' GCCGGC
|
5' ---C GGCCG--- 3' 3' ---GCCGG C--- 5'
|
AaaI, BseX3I, BstZI, EagI, Eco52I, SenPT16I, XmaIII
|
Ecl18kI
|
2FQZ
|
Enterobacter cloacae 18k
|
5' CCNGG 3' GGNCC
|
5' --- CCNGG--- 3' 3' ---GGNCC --- 5'
|
|
Ecl37kI
|
|
Enterobacter cloacae 37k
|
5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
AjoI, AliAJI, Ecl2zI, PaePI, Psp23I, PstI, Sag16I, SflI, YenI
|
Ecl2zI
|
|
Enterobacter cloacae 2z
|
5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
AliAJI, Bsp63I, CfrA4I, PaePI, Pfl21I, PstI, SflI, Sst12I, YenI
|
Eco24I
|
|
Escherichia coli RFL24
|
5' GRGCYC 3' CYCGRG
|
5' ---GRGCY C--- 3' 3' ---C YCGRG--- 5'
|
|
Eco31I
|
|
Escherichia coli RFL31
|
5' GGTCTC 3' CCAGAG
|
5' ---GGTCTCN NNNN--- 3' 3' ---CCAGAGNNNNN --- 5'
|
|
Eco32I
|
|
Escherichia coli RFL32
|
5' GATATC 3' CTATAG
|
5' ---GAT ATC--- 3' 3' ---CTA TAG--- 5'
|
|
Eco47I
|
|
Escherichia coli RFL47
|
5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme18I, BsrAI, Csp68KI, ErpI, FssI, HgiEI, Kzo49I, SmuEI
|
Eco47III
|
|
Escherichia coli RFL47
|
5' AGCGCT 3' TCGCGA
|
5' ---AGC GCT--- 3' 3' ---TCG CGA--- 5'
|
AfeI, AitI, Aor51H, FunI
|
Eco52I
|
|
Escherichia coli RFL52
|
5' CGGCCG 3' GCCGGC
|
5' ---C GGCCG--- 3' 3' ---GCCGG C--- 5'
|
AaaI, BseX3I, BstZI, EagI, EclXI, SenPT16I, XmaIII
|
Eco56I
|
|
Escherichia coli RFL56
|
5' GCCGGC 3' CGGCCG
|
5' ---G CCGGC--- 3' 3' ---CGGCC G--- 5'
|
|
Eco57I
|
|
Escherichia coli RFL57
|
5' CTGAAG 3' GACTTC
|
5' ---CTGAAGN12NNNN --- 3' 3' ---GACTTCN12NN NN--- 5'
|
AcuI, BspKT5I
|
Eco64I
|
|
Escherichia coli RFL64
|
5' GGYRCC 3' CCRYGG
|
5' ---G GYRCC--- 3' 3' ---CCRYG G--- 5'
|
BanI, BbvBI, BspT107I, BshNI, HgiCI, HgiHI, MspB4I, PfaAI
|
Eco72I
|
|
Escherichia coli RFL72
|
5' CACGTG 3' GTGCAC
|
5' ---CAC GTG--- 3' 3' ---GTG CAC--- 5'
|
AcvI, BcoAI, BbrPI, PmaCI, PmlI, PspCI
|
Eco78I
|
|
Escherichia coli RFL78
|
5' GGCGCC 3' CCGCGG
|
5' ---GGC GCC--- 3' 3' ---CCG CGG--- 5'
|
|
Eco81I
|
|
Escherichia coli RFL81
|
5' CCTNAGG 3' GGANTCC
|
5' ---CC TNAGG--- 3' 3' ---GGANT CC--- 5'
|
AxyI, Bse21I, BspR7I, Bsu36I, Eco81I, MstII, OxaNI, SshAI
|
Eco88I
|
|
Escherichia coli RFL88
|
5' CYCGRG 3' GRGCYC
|
5' ---C YCGRG--- 3' 3' ---GRGCY C--- 5'
|
AquI, BcoI, BsiHKCI, BstSI, Eco27kI, NspSAI, PlaAI, PunAI
|
Eco91I
|
|
Escherichia coli RFL91
|
5' GGTNACC 3' CCANTGG
|
5' ---G GTNACC--- 3' 3' ---CCANTG G--- 5'
|
Bse64I, BstEII, BstPI, BstT9I, BstT10I, EcaI, Eci125I, NspSAII
|
Eco105I
|
|
Escherichia coli RFL105
|
5' TACGTA 3' ATGCAT
|
5' ---TAC GTA--- 3' 3' ---ATG CAT--- 5'
|
|
Eco130I
|
|
Escherichia coli RFL130
|
5' CCWWGG 3' GGWWCC
|
5' ---C CWWGG--- 3' 3' ---GGWWC C--- 5'
|
|
Eco147I
|
|
Escherichia coli RFL147
|
5' AGGCCT 3' TCCGGA
|
5' ---AGG CCT--- 3' 3' ---TCC GGA--- 5'
|
AatI, AspMI, GdiI, PceI, Pme55I, SarI, Sru30DI, SseBI, SteI, StuI
|
Eco255I
|
|
Escherichia coli RFL255
|
5' AGTACT 3' TCATGA
|
5' ---AGT ACT--- 3' 3' ---TCA TGA--- 5'
|
Acc113I, AssI,
|
BmcAI, Bpa34I,
|
DpaI, RflFII, ScaI, ZrmI
|
|
Eco1831I
|
|
Escherichia coli RFL1831
|
5' CCSGG 3' GGSCC
|
5' --- CCSGG--- 3' 3' ---GGSCC --- 5'
|
AhaI, AseII, AsuC2I, BcnI,
|
BpuMI,
|
CauII, EcoHI, HgiS22I
|
|
EcoA4I
|
|
Escherichia coli A4
|
5' GGTCTC 3' CCAGAG
|
5' ---GGTCTCN NNNN--- 3' 3' ---CCAGAGNNNNN --- 5'
|
|
EcoHI
|
|
Escherichia coli HI
|
5' CCSGG 3' GGSCC
|
5' --- CCSGG--- 3' 3' ---GGSCC --- 5'
|
AsuC2I, BcnI, BpuMI, CauII, EcoHI, HgiS22I, Kpn49kII, NciI
|
EcoHK31I
|
|
Escherichia coli HK31
|
5' YGGCCR 3' RCCGGY
|
5' ---Y GGCCR--- 3' 3' ---RCCGG Y--- 5'
|
|
EcoICRI
|
|
Escherichia coli 2bT
|
5' GAGCTC 3' CTCGAG
|
5' ---GAG CTC--- 3' 3' ---CTC GAG--- 5'
|
|
Eco75KI
|
|
Escherichia coli BKM
|
5' GRGCYC 3' CYCGRG
|
5' ---GRGCY C--- 3' 3' ---C YCGRG--- 5'
|
|
Eco57MI
|
|
Escherichia coli RFL57M
|
5' CTGRAG 3' GACYTC
|
5' ---CTGRAGN12NNNN --- 3' 3' ---GACYTCN12NN NN--- 5'
|
|
EcoNI
|
|
Escherichia coli
|
5' CCTN5AGG 3' GGAN5TCC
|
5' ---CCTNN NNNAGG--- 3' 3' ---GGANNN NNTCC--- 5'
|
|
EcoO44I
|
|
Escherichia coli O44 Hiromi
|
5' GGTCTC 3' CCAGAG
|
5' ---GGTCTCN NNNN--- 3' 3' ---CCAGAGNNNNN --- 5'
|
|
EcoO65I
|
|
Escherichia coli K11a
|
5' GGTNACC 3' CCANTGG
|
5' ---G GTNACC--- 3' 3' ---CCANTG G--- 5'
|
AcrII, Bse64I, BstEII, BstPI, BstT9I, EcaI, Eco91I, EcoO128I
|
EcoO109I
|
1WTD
|
Escherichia coli H709c
|
5' RGGNCCY 3' YCCNGGR
|
5' ---RG GNCCY--- 3' 3' ---YCCNG GR--- 5'
|
|
EcoO128I
|
|
Escherichia coli O128Ly3
|
5' GGTNACC 3' CCANTGG
|
5' ---G GTNACC--- 3' 3' ---CCANTG G--- 5'
|
AspAI, Bse64I, BstEII, BstT9I, EcaI, EcoO65I, NspSAII, PspEI
|
EcoP15I
|
|
Escherichia coli P15
|
5' CAGCAG 3' GTCGTC
|
5' ---CAGCAGN25NN --- 3' 3' ---GTCGTCN25 NN--- 5'
|
|
EcoR124II
|
2y3t,
2w74
Search
|
Escherichia coli
|
5' 5'-GAAN7RTCG-3'
|
5'
|
|
EcoRI
|
1QC9,
Search EcoR1 structures
|
Escherichia coli RY13
|
5' GAATTC 3' CTTAAG
|
5' ---G AATTC--- 3' 3' ---CTTAA G--- 5'
|
|
EcoRII
|
1NA6
|
Escherichia coli R245
|
5' CCWGG 3' GGWCC
|
5' --- CCWGG--- 3' 3' ---GGWCC --- 5'
|
ApaORI, BseBI, BspNI, BstNI, BstOI, Bst2UI, MvaI, SspAI, ZanI
|
EcoRV
|
1RVE
Search EcoRV
|
Escherichia coli J62 pLG74
|
5' GATATC 3' CTATAG
|
5' ---GAT ATC--- 3' 3' ---CTA TAG--- 5'
|
|
EcoT14I
|
|
Escherichia coli TB14
|
5' CCWWGG 3' GGWWCC
|
5' ---C CWWGG--- 3' 3' ---GGWWC C--- 5'
|
|
EcoT22I
|
|
Escherichia coli TB22
|
5' ATGCAT 3' TACGTA
|
5' ---ATGCA T--- 3' 3' ---T ACGTA--- 5'
|
BfrBI, Csp68KIII, Mph1103I, NsiI, PinBI, Ppu10I, SepI, SspD5II
|
EcoT38I
|
|
Escherichia coli TH38
|
5' GRGCYC 3' CYCGRG
|
5' ---GRGCY C--- 3' 3' ---C YCGRG--- 5'
|
|
EcoVIII
|
|
Escherichia coli E1585-68
|
5' AAGCTT 3' TTCGAA
|
5' ---A AGCTT--- 3' 3' ---TTCGA A--- 5'
|
|
Eco13kI
|
|
Escherichia coli 13k
|
5' CCNGG 3' GGNCC
|
5' --- CCNGG--- 3' 3' ---GGNCC --- 5'
|
|
Eco21kI
|
|
Escherichia coli 21k
|
5' CCNGG 3' GGNCC
|
5' --- CCNGG--- 3' 3' ---GGNCC --- 5'
|
|
Eco27kI
|
|
Escherichia coli 27
|
5' CYCGRG 3' GRGCYC
|
5' ---C YCGRG--- 3' 3' ---GRGCY C--- 5'
|
Ama87I, AvaI, Bse15I, BsoBI, BstSI, NspIII, OfoI, PunAI
|
Eco29kI
|
|
Escherichia coli
|
5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
|
Eco53kI
|
|
Escherichia coli 53k
|
5' GAGCTC 3' CTCGAG
|
5' ---GAG CTC--- 3' 3' ---CTC GAG--- 5'
|
|
Eco137kI
|
|
Escherichia coli 137k
|
5' CCNGG 3' GGNCC
|
5' --- CCNGG--- 3' 3' ---GGNCC --- 5'
|
|
EgeI
|
|
Enterobacter gergoviae NA
|
5' GGCGCC 3' CCGCGG
|
5' ---GGC GCC--- 3' 3' ---CCG CGG--- 5'
|
|
EheI
|
|
Erwinia herbicola 9/5
|
5' GGCGCC 3' CCGCGG
|
5' ---GGC GCC--- 3' 3' ---CCG CGG--- 5'
|
|
ErhI
|
|
Erwinia rhaponici B9
|
5' CCWWGG 3' GGWWCC
|
5' ---C CWWGG--- 3' 3' ---GGWWC C--- 5'
|
|
ErhB9I
|
|
Erwinia rhaponici B9
|
5' CGATCG 3' GCTAGC
|
5' ---CGAT CG--- 3' 3' ---GC TAGC--- 5'
|
Afa16RI, Afa22MI, EagBI, NblI, Ple19I, Psu161I, RshI, XorII
|
ErhB9II
|
|
Erwinia rhaponici B9
|
5' CCWWGG 3' GGWWCC
|
5' ---C CWWGG--- 3' 3' ---GGWWC C--- 5'
|
|
ErpI
|
|
Erwinia rhaponici
|
5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme18I, BthAI, Csp68KI, Eco47I, FssI, HgiEI, Kzo49I, SmuEI
|
EsaBC3I
|
|
Environmental sample BC3
|
5' TCGA 3' AGCT
|
5' ---TC GA--- 3' 3' ---AG CT--- 5'
|
|
EsaBC4I
|
|
Environmental sample BC4
|
5' GGCC 3' CCGG
|
5' ---GG CC--- 3' 3' ---CC GG--- 5'
|
|
EspI
|
|
Eucapsis sp.
|
5' GCTNAGC 3' CGANTCG
|
5' ---GC TNAGC--- 3' 3' ---CGANT CG--- 5'
|
|
Esp3I
|
|
Erwinia sp. RFL3
|
5' CGTCTC 3' GCAGAG
|
5' ---CGTCTCN NNNN--- 3' 3' ---GCAGAGNNNNN --- 5'
|
|
Esp4I
|
|
Erwinia sp. RFL4
|
5' CTTAAG 3' GAATTC
|
5' ---C TTAAG--- 3' 3' ---GAATT C--- 5'
|
|
Esp1396I
|
|
Enterobacter sp. RFL1396
|
5' CCAN5TGG 3' GGTN5ACC
|
5' ---CCANNNN NTGG--- 3' 3' ---GGTN NNNNACC--- 5'
|
AccB7I, AcpII, Asp10HII, BasI, PflBI, PflMI, Van91I
|