Enzyme
|
PDB code
|
Source
|
Recognition sequence
|
Cut
|
Isoschizomers
|
Bac36I
|
|
Bacillus alcalophilus 36
|
5' GGNCC 3' CCNGG
|
5' ---G GNCC--- 3' 3' ---CCNG G--- 5'
|
AspS9I, AvcI, BavAII, Bce22I, Bsp1894I, Bsu54I, FmuI, NspIV
|
BaeI
[7]
|
|
Bacillus sphaericus
|
5' ACN4GTAYC 3' TGN4CATYG
|
5' ---ACN4GTAYCN6NNNNNN --- 3' 3' ---TGN4CATYGN6N NNNNN--- 5'
|
— None in May 2010 —
|
BalI
[8]
[9]
|
|
Brevibacterium albidum
|
5' TGGCCA 3' ACCGGT
|
5' ---TGG CCA--- 3' 3' ---ACC GGT--- 5'
|
|
Bal228I
|
|
Bacillus alcalophilus 228
|
5' GGNCC 3' CCNGG
|
5' ---G GNCC--- 3' 3' ---CCNG G--- 5'
|
AspS9I, AvcI, BavAII, BshKI, Bsp1894I, Bsu54I, FmuI, NspIV
|
BamHI
[10]
[11]
[12]
[13]
[14]
[15]
[16]
[17]
[18]
[19]
[20]
[21]
[22]
[23]
[24]
[25]
[26]
[27]
[28]
[29]
[30]
|
1BAM
|
Bacillus amyloliquefaciens H
|
5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
AccEBI, AliI, ApaCI, AsiI, Bce751I, Bsp98I, Bsp4009I, BspAAIII, CelI, Nsp29132II, NspSAIV, SolI, SurI
|
BamNII
|
|
Bacillus amyloliquefaciens N
|
5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
BcuAI, BsrAI, CauI, EagMI, FdiI, HgiCII, HgiJI, SinI
|
BanI
[31]
[32]
|
|
Bacillus aneurinolyticus
|
5' GGYRCC 3' CCRYGG
|
5' ---G GYRCC--- 3' 3' ---CCRYG G--- 5'
|
AccB1I, BbvBI, BspT107I, Eco64I, HgiCI, HgiHI, MspB4I, PfaAI
|
BanII
[12]
[31]
|
|
Bacillus aneurinolyticus
|
5' GRGCYC 3' CYCGRG
|
5' ---GRGCY C--- 3' 3' ---C YCGRG--- 5'
|
|
BanIII
[31]
|
|
Bacillus aneurinolyticus
|
5' ATCGAT 3' TAGCTA
|
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5'
|
AagI, BavCI, Bsa29I, BseCI, BspDI, Bsu15I, BsuTUI, ClaI
|
BanAI
|
|
Bacillus anthracis
|
5' GGCC 3' CCGG
|
5' ---GG CC--- 3' 3' ---CC GG--- 5'
|
|
BasI
|
|
Bacillus sp.
|
5' CCAN5TGG 3' GGTN5ACC
|
5' ---CCANNNN NTGG--- 3' 3' ---GGTN NNNNACC--- 5'
|
AccB7I, AcpII, Asp10HII, Esp1396I, PflBI, PflMI, Van91I
|
BauI
|
|
Bacillus aquaemaris RFL1
|
5' CACGAG 3' GTGCTC
|
5' ---C ACGAG--- 3' 3' ---GTGCT C--- 5'
|
|
BavI
|
|
Bacillus alvei
|
5' CAGCTG 3' GTCGAC
|
5' ---CAG CTG--- 3' 3' ---GTC GAC--- 5'
|
|
BavAI
|
|
Bacillus alvei A
|
5' CAGCTG 3' GTCGAC
|
5' ---CAG CTG--- 3' 3' ---GTC GAC--- 5'
|
|
BavAII
|
|
Bacillus alvei A
|
5' GGNCC 3' CCNGG
|
5' ---G GNCC--- 3' 3' ---CCNG G--- 5'
|
AspS9I, AvcI, BavBII, BshKI, Bsp1894I, Bsu54I, FmuI, NspIV
|
BavBI
|
|
Bacillus alvei B
|
5' CAGCTG 3' GTCGAC
|
5' ---CAG CTG--- 3' 3' ---GTC GAC--- 5'
|
|
BavBII
|
|
Bacillus alvei B
|
5' GGNCC 3' CCNGG
|
5' ---G GNCC--- 3' 3' ---CCNG G--- 5'
|
AspS9I, Bac36I, BavAII, BshKI, BspBII, Bsu54I, FmuI, Pde12I
|
BavCI
|
|
Bacillus alvei C
|
5' ATCGAT 3' TAGCTA
|
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5'
|
AagI, BanIII, Bsa29I, BseCI, BspDI, Bsu15I, BsuTUI, ClaI
|
BbeI
[33]
|
|
Bifidobacterium breve YIT4006
|
5' GGCGCC 3' CCGCGG
|
5' ---GGCGC C--- 3' 3' ---C CGCGG--- 5'
|
|
BbiII
|
|
Bifidobacterium bifidum YIT4007
|
5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AhaII, BbiII, HgiHII, Hin1I, Hsp92I, Msp17I, PamII
|
Bbi24I
|
|
Bifidobacterium bifidum S-24
|
5' ACGCGT 3' TGCGCA
|
5' ---A CGCGT--- 3' 3' ---TGCGC A--- 5'
|
|
BbrI
|
|
Bordetella bronchiseptica 4994
|
5' AAGCTT 3' TTCGAA
|
5' ---A AGCTT--- 3' 3' ---TTCGA A--- 5'
|
|
Bbr7I
|
|
Bacillus brevis 7
|
5' GAAGAC 3' CTTCTG
|
5' ---GAAGACN6N NNNNN--- 3' 3' ---CTTCTGN6NNNNNN --- 5'
|
|
BbrPI
[34]
[35]
|
|
Bacillus brevis
|
5' CACGTG 3' GTGCAC
|
5' ---CAC GTG--- 3' 3' ---GTG CAC--- 5'
|
AcvI, BcoAI, Eco72I, PmaCI, PmlI, PspCI
|
BbsI
[36]
|
|
Bacillus laterosporus
|
5' GAAGAC 3' CTTCTG
|
5' ---GAAGACNN NNNN--- 3' 3' ---CTTCTGNNNNNN --- 5'
|
|
BbuI
[37]
|
|
Bacillus circulans
|
5' GCATGC 3' CGTACG
|
5' ---GCATG C--- 3' 3' ---C GTACG--- 5'
|
|
BbvI
[38]
[39]
|
|
Bacillus brevis
|
5' GCAGC 3' CGTCG
|
5' ---GCAGCN7N NNNN--- 3' 3' ---CGTCGN7NNNNN --- 5'
|
AlwXI, BseKI, BseXI, Bsp423I, Bst12I, Bst71I, BstV1I
|
BbvII
[40]
|
|
Bacillus brevis 80
|
5' GAAGAC 3' CTTCTG
|
5' ---GAAGACNN NNNN--- 3' 3' ---CTTCTGNNNNNN --- 5'
|
|
Bbv12I
[41]
|
|
Bacillus brevis 12
|
5' GWGCWC 3' CWCGWG
|
5' ---GWGCW C--- 3' 3' ---C WCGWG--- 5'
|
Alw21I, AspHI, Bsh45I, BsiHKAI,
|
HgiAI,
|
HpyF46II,
|
MspV281I
|
|
Bbv16II
|
|
Bacillus brevis 16
|
5' GAAGAC 3' CTTCTG
|
5' ---GAAGACNN NNNN--- 3' 3' ---CTTCTGNNNNNN --- 5'
|
|
BbvAI
|
|
Bacillus brevis A
|
5' GAAN4TTC 3' CTTN4AAG
|
5' ---GAANN NNTTC--- 3' 3' ---CTTNN NNAAG--- 5'
|
Asp700I, MroXI, PdmI, XmnI
|
BbvAII
|
|
Bacillus brevis A
|
5' ATCGAT 3' TAGCTA
|
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5'
|
BavCI, Bci29I, Bli86I, BseCI, BspZEI, Bsu15I, ClaI, Rme21I
|
BbvAIII
|
|
Bacillus brevis A
|
5' TCCGGA 3' AGGCCT
|
5' ---T CCGGA--- 3' 3' ---AGGCC T--- 5'
|
AccIII, Aor13HI, BlfI, BseAI, Bsp13I, BspEI, Bsu23I, Kpn2I
|
BbvBI
|
|
Bacillus brevis B
|
5' GGYRCC 3' CCRYGG
|
5' ---G GYRCC--- 3' 3' ---CCRYG G--- 5'
|
BanI, BshNI, BspT107I, Eco64I, HgiCI, HgiHI, MspB4I, PfaAI
|
BbvCI
[42]
|
|
Bacillus brevis
|
5' CCTCAGC 3' GGAGTCG
|
5' ---CC TCAGC--- 3' 3' ---GGAGT CG--- 5'
|
AbeI
|
Bca77I
|
|
Bacillus caldolyticus
|
5' WCCGGW 3' WGGCCW
|
5' ---W CCGGW--- 3' 3' ---WGGCC W--- 5'
|
|
BccI
|
|
Bacteroides caccae
|
5' CCATC 3' GGTAG
|
5' ---CCATCNNNN N--- 3' 3' ---GGTAGNNNNN --- 5'
|
|
Bce4I
|
|
Bacillus cereus B4
|
5' GCN7GC 3' CGN7CG
|
5' ---GCNNNNN NNGC--- 3' 3' ---CGNN NNNNNCG--- 5'
|
|
Bce22I
|
|
Bacillus cereus 22
|
5' GGNCC 3' CCNGG
|
5' ---G GNCC--- 3' 3' ---CCNG G--- 5'
|
AspS9I, Bac36I, BavAII, BshKI, BspBII, CcuI, FmuI, Pde12I
|
Bce83I
[43]
|
|
Bacillus cereus 83
|
5' CTTGAG 3' GAACTC
|
5' ---CTTGAGN13NNN --- 3' 3' ---GAACTCN13N NN--- 5'
|
|
Bce243I
|
|
Bacillus cereus
|
5' GATC 3' CTAG
|
5' --- GATC--- 3' 3' ---CTAG --- 5'
|
Bfi57I, Bsp143I, BspJI, BstMBI, CviAI, Kzo9I, NdeII, Sth368I
|
Bce751I
|
|
Bacillus cereus 751
|
5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
BamHI, Bce751I, BnaI, Bsp98I, Bsp4009I, BstI, NspSAIV, Pfl8I
|
BceAI
|
|
Bacillus cereus 1315
|
5' ACGGC 3' TGCCG
|
5' ---ACGGCN11N NN--- 3' 3' ---TGCCGN11NNN --- 5'
|
|
BceBI
|
|
Bacillus cereus 1323
|
5' CGCG 3' GCGC
|
5' ---CG CG--- 3' 3' ---GC GC--- 5'
|
AccII, Bsh1236I, BtkI, Csp68KVI, FalII, FauBII, FnuDII, SelI, ThaI
|
BceCI
|
|
Bacillus cereus 1195
|
5' GCN7GC 3' CGN7CG
|
5' ---GCNNNNN NNGC--- 3' 3' ---CGNN NNNNNCG--- 5'
|
|
BcefI
[44]
|
|
Bacillus cereus fluorescens
|
5' ACGGC 3' TGCCG
|
5' ---ACGGCN10NN N--- 3' 3' ---TGCCGN10NNN --- 5'
|
|
BcgI
[45]
[46]
|
|
Bacillus coagulans
|
5' CGAN6TGC 3' GCTN6ACG
|
5' ---CGAN6TGCN9NNN --- 3' 3' ---GCTN6ACGN9N NN--- 5'
|
|
Bci29I
|
|
Bacillus circulans 29
|
5' ATCGAT 3' TAGCTA
|
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5'
|
BavCI, BciBI, Bli86I, BseCI, BspZEI, Bsu15I, ClaI, Rme21I
|
BciBI
|
|
Bacillus circulans B
|
5' ATCGAT 3' TAGCTA
|
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5'
|
BavCI, BcmI, Bli86I, BseCI, BspZEI, Bsu15I, ClaI, Rme21I
|
BciBII
|
|
Bacillus circulans B
|
5' CCWGG 3' GGWCC
|
5' ---CC WGG--- 3' 3' ---GGW CC--- 5'
|
AjnI, ApyI, BptI, Bst1I, BstOI, BstM6I, Bst2UI, EcoRII, MvaI
|
BciVI
[47]
|
|
Bacillus circulans
|
5' GTATCC 3' CATAGG
|
5' ---GTATCCN4NN --- 3' 3' ---CATAGGN4N N--- 5'
|
BfuI
|
BclI
[15]
[48]
[49]
|
|
Bacillus caldolyticus
|
5' TGATCA 3' ACTAGT
|
5' ---T GATCA--- 3' 3' ---ACTAG T--- 5'
|
AbaI, BsiQI, BspXII,
|
BstT7I, FbaI, Ksp22I,
|
ParI
|
|
BcmI
|
|
Bacillus sp.
|
5' ATCGAT 3' TAGCTA
|
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5'
|
BsuTUI, Bsu15I, BavCI, Bli86I, BspZEI, Rme21I, BseCI, BdiI
|
BcnI
[50]
[51]
[52]
|
2ODH
|
Bacillus centrosporus RFL1
|
5' CCSGG 3' GGSCC
|
5' ---CC SGG--- 3' 3' ---GGS CC--- 5'
|
AhaI, AseII, AsuC2I,
|
BpuMI,
|
CauII,
|
Eco1831I, HgiS22I,Kpn49kII, NciI
|
|
BcoI
[53]
|
|
Bacillus coagulans SM 1
|
5' CYCGRG 3' GRGCYC
|
5' ---C YCGRG--- 3' 3' ---GRGCY C--- 5'
|
Ama87I, AquI, BsoBI, BstSI, Eco88I, NspSAI, OfoI, PunAI
|
Bco5I
|
|
Bacillus coagulans 5
|
5' CTCTTC 3' GAGAAG
|
5' ---CTCTTCN NNN--- 3' 3' ---GAGAAGNNNN --- 5'
|
|
Bco27I
|
|
Bacillus coagulans 27
|
5' CCGG 3' GGCC
|
5' ---C CGG--- 3' 3' ---GGC C--- 5'
|
|
Bco116I
|
|
Bacillus coagulans 116
|
5' CTCTTC 3' GAGAAG
|
5' ---CTCTTCN NNN--- 3' 3' ---GAGAAGNNNN --- 5'
|
|
Bco118I
|
|
Bacillus coagulans 118
|
5' RCCGGY 3' YGGCCR
|
5' ---R CCGGY--- 3' 3' ---YGGCC R--- 5'
|
|
BcoAI
|
|
Bacillus coagulans AUCM B-732
|
5' CACGTG 3' GTGCAC
|
5' ---CAC GTG--- 3' 3' ---GTG CAC--- 5'
|
AcvI, BbrPI, Eco72I, PmaCI, PmlI, PspCI
|
BcoKI
|
|
Bacillus coagulans
|
5' CTCTTC 3' GAGAAG
|
5' ---CTCTTCN NNN--- 3' 3' ---GAGAAGNNNN --- 5'
|
|
BcuI
|
|
Bacillus coagulans Vs 29-022
|
5' ACTAGT 3' TGATCA
|
5' ---A CTAGT--- 3' 3' ---TGATC A--- 5'
|
AhII, AclNI, SpeI
|
BcuAI
|
|
Bacillus cereus BKM B-814
|
5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
BamNxI, BsrAI, Csp68KI, EagMI, FssI, HgiCII, HgiJI, SinI
|