Legend of nucleobases | |
---|---|
Code | Nucleotide represented |
A | Adenine (A) |
C | Cytosine (C) |
G | Guanine (G) |
T | Thymine (T) |
N | A, C, G or T |
M | A or C |
R | A or G |
W | A or T |
Y | C or T |
S | C or G |
K | G or T |
H | A, C or T |
B | C, G or T |
V | A, C or G |
D | A, G or T |
This article contains a list of restriction enzymes whose names start with A and have a clearly defined cutting site.
The following information is given for each enzyme:
Enzyme | PDB code | REBASE Number | Source | Recognition sequence | Cut | Isoschizomers |
---|---|---|---|---|---|---|
AaaI | 1 | Acetobacter aceti | 5' CGGCCG 3' GCCGGC
|
5' ---C GGCCG--- 3' 3' ---GCCGG C--- 5'
|
BseX3I, BstZI, EagI, EclXI, Eco52I, SenPT16I, XmaIII | |
AagI | 4 | Achromobacter agile | 5' ATCGAT 3' TAGCTA
|
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5'
|
BanIII, BavCI, Bsa29I, BseCI, BspDI, Bsu15I, BsuTUI, ClaI | |
AanI | 15358 | Arthrobacter aurescens RFL2 | 5' TTATAA 3' AATATT
|
5' ---TTA TAA--- 3' 3' ---AAT ATT--- 5'
|
PsiI, Csp1BORF7380P | |
AarI [7] | 2892 | Arthrobacter aurescens SS2-322 | 5' CACCTGC 3' GTGGACG
|
5' ---CACCTGCN3N NNNN--- 3' 3' ---GTGGACGN3NNNNN --- 5'
|
PaqCI | |
AasI | 5465 | Arthrobacter aurescens RFL3 | 5' GACN6GTC 3' CTGN6CAG
|
5' ---GACNNNN NNGTC--- 3' 3' ---CTGNN NNNNCAG--- 5'
|
DrdI, DseDI | |
AatI [8] | 6 | Acetobacter aceti | 5' AGGCCT 3' TCCGGA
|
5' ---AGG CCT--- 3' 3' ---TCC GGA--- 5'
|
AspMI, Eco147I, Eco1524I, PceI, Pme55I, SarI, Sru30DI, SteI | |
AatII [8] [9] [10] [11] | 7 | Acetobacter aceti | 5' GACGTC 3' CTGCAG
|
5' ---GACGT C--- 3' 3' ---C TGCAG--- 5'
|
Ssp5230I, ZraI | |
AauI | 3010 | Arthrobacter aurescens | 5' TGTACA 3' ACATGT
|
5' ---T GTACA--- 3' 3' ---ACATG T--- 5'
|
BsmRI, Bsp1407I, BsrGI, BstAUI, Ssp4800I, SspBI | |
AbaI | 3029 | Azospirillum brasilense UQ 1796 | 5' TGATCA 3' ACTAGT
|
5' ---T GATCA--- 3' 3' ---ACTAG T--- 5'
|
BclI, BsiQI, BspXII, BstT7I, FbaI, Ksp22I, ParI | |
AbeI | 3097 | Azotobacter beijerinckii Slo 54-028 | 5' CCTCAGC 3' GGAGTCG
|
5' ---CC TCAGC--- 3' 3' ---GGAGT CG--- 5'
|
BbvCI | |
AbrI | 8 | Azospirillum brasilense | 5' CTCGAG 3' GAGCTC
|
5' ---C TCGAG--- 3' 3' ---GAGCT C--- 5'
|
BluI, BspAAI, BssHI, EscI, PaeR7I, SciI, Sfr274I, Sol10179I, StrI, TliI | |
AbsI | 14594 | Arthrobacter sp. 7M06 | 5' CCTCGAGG 3' GGAGCTCC
|
5' ---CC TCGAGG--- 3' 3' ---GGAGCT CC--- 5'
|
None as of 4 Apr. 2019 | |
AccI [12] [13] [14] [15] | 18 | Acinetobacter calcoaceticus | 5' GTMKAC 3' CAKMTG
|
5' ---GT MKAC--- 3' 3' ---CAKM TG--- 5'
|
FblI, XmiI | |
AccII [12] [16] | 19 | Acinetobacter calcoaceticus | 5' CGCG 3' GCGC
|
5' ---CG CG--- 3' 3' ---GC GC--- 5'
|
Bsh1236I, Bsp50I, BstFNI, BstUI, MvnI, SelI, BceBI, BepI, Bpu95I | |
AccIII [17] | 20 | Acinetobacter calcoaceticus | 5' TCCGGA 3' AGGCCT
|
5' ---T CCGGA--- 3' 3' ---AGGCC T--- 5'
|
Aor13HI, BbvAIII, BlfI, BseAI, BsiMI, BspEI, CauB3I, Kpn2I, MroI, PtaI | |
Acc16I | 2638 | Acinetobacter calcoaceticus 16 | 5' TGCGCA 3' ACGCGT
|
5' ---TGC GCA--- 3' 3' ---ACG CGT--- 5'
|
AosI, AviII, FdiII, FspI, MstI, NsbI, PamI, Pun14627I | |
Acc36I [18] | 4162 | Acinetobacter calcoaceticus 36 | 5' ACCTGC 3' TGGACG
|
5' ---ACCTGCN3N NNNN--- 3' 3' ---TGGACGN3NNNNN --- 5'
|
BfuAI, BspMI, BveI | |
Acc65I [19] | 14 | Acinetobacter calcoaceticus 65 | 5' GGTACC 3' CCATGG
|
5' ---G GTACC--- 3' 3' ---CCATG G--- 5'
|
AhaB8I, Asp718I, KpnI, SthI | |
Acc113I | 2665 | Acinetobacter calcoaceticus 113 | 5' AGTACT 3' TCATGA
|
5' ---AGT ACT--- 3' 3' ---TCA TGA--- 5'
|
AssI, BmcAI, Bpa34I, DpaI, Eco255I, RflFII, ScaI, ZrmI | |
AccB1I | 15 | Acinetobacter calcoaceticus B1 | 5' GGYRCC 3' CCRYGG
|
5' ---G GYRCC--- 3' 3' ---CCRYG G--- 5'
|
BanI, BbvBI, BshNI, BspT107I, Eco64I, HgiCI, HgiHI, MspB4I | |
AccB2I | 2666 | Acinetobacter calcoaceticus B2 | 5' RGCGCY 3' YCGCGR
|
5' ---RGCGC Y--- 3' 3' ---Y CGCGR--- 5'
|
BfoI, Bme142I, Bsp143II, BstH2I, HaeII, LpnI | |
AccB7I [20] | 16 | Acinetobacter calcoaceticus B7 | 5' CCAN5TGG 3' GGTN5ACC
|
5' ---CCANNNN NTGG--- 3' 3' ---GGTN NNNNACC--- 5'
|
AcpII, Asp10HII, BasI, Esp1396I, PflBI, PflMI, Van91I | |
AccBSI [21] | 2733 | Acinetobacter calcoaceticus BS | 5' CCGCTC 3' GGCGAG
|
5' ---CCG CTC--- 3' 3' ---GGC GAG--- 5'
|
BsrBI, BstD102I, Bst31NI, MbiI | |
AccEBI | 17 | Acinetobacter calcoaceticus EBF 65/65 | 5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
AsiI, BamHI, Bce751I, Bsp98I, BspAAIII, CelI, OkrAI, Uba4009I | |
AceI | 2571 | Anabaena cedrorum | 5' GCWGC 3' CGWCG
|
5' ---G CWGC--- 3' 3' ---CGWC G--- 5'
|
ApeKI, SuiI, Taq52I, TseI | |
AceII | 2570 | Anabaena cedrorum | 5' GCTAGC 3' CGATCG
|
5' ---GCTAG C--- 3' 3' ---C GATCG--- 5'
|
AsuNHI, BmtI, BspOI, , LlaG2I, NheI, PstNHI | |
AceIII | 2569 | Anabaena cedrorum | 5' CAGCTC 3' GTCGAG
|
5' ---CAGCTCN5N NNNN--- 3' 3' ---GTCGAGN5NNNNN --- 5'
|
— None as of May 2010 — | |
AciI [11] [22] | 21 | Arthrobacter citreus | 5' CCGC 3' GGCG
|
5' ---C CGC--- 3' 3' ---GGC G--- 5'
|
SsiI | |
AclI [23] | 2181 | Acinetobacter calcoaceticus M4 | 5' AACGTT 3' TTGCAA
|
5' ---AA CGTT--- 3' 3' ---TTGC AA--- 5'
|
Psp1406I | |
AclNI | 2667 | Acinetobacter calcoaceticus N20 | 5' ACTAGT 3' TGATCA
|
5' ---A CTAGT--- 3' 3' ---TGATC A--- 5'
|
AhlI, BcuI, SpeI | |
AclWI | 2668 | Acinetobacter calcoaceticus W2131 | 5' GGATC 3' CCTAG
|
5' ---GGATCN3N N--- 3' 3' ---CCTAGN3NN --- 5'
|
AlwI, BinI, BpuFI, BsrWI, BspPI, BstH9I, Bst31TI, EacI, Ral8I | |
AcoI | 11822 | Acinetobacter calcoaceticus | 5' YGGCCR 3' RCCGGY
|
5' ---Y GGCCR--- 3' 3' ---RCCGG Y--- 5'
|
EaeI, Bfi89I, CfrI, EcoHK31I | |
AcpI | 22 | Acidiphilium cryptum 25H | 5' TTCGAA 3' AAGCTT
|
5' ---TT CGAA--- 3' 3' ---AAGC TT--- 5'
|
Asp10HI, Bpu14I, Bsp119I, BstBI, Csp45I, FspII, MlaI, NspV, SspRFI | |
AcpII | 23 | Acidiphilium cryptum 25H | 5' CCAN5TGG 3' GGTN5ACC
|
5' ---CCANNNN NTGG--- 3' 3' ---GGTN NNNNACC--- 5'
|
AccB7I, Asp10HII, BasI, Esp1396I, PflBI, PflMI, Van91I | |
AcrII | 25 | Anabaenopsis circularis | 5' GGTNACC 3' CCANTGG
|
5' ---G GTNACC--- 3' 3' ---CCANTG G--- 5'
|
AspAI, Bse64I, BseT9I, BstEII, BstPI, Eco91I, EcoO65I, PspEI | |
AcsI [24] | 2184 | Arthrobacter citreus 310 | 5' RAATTY 3' YTTAAR
|
5' ---R AATTY--- 3' 3' ---YTTAA R--- 5'
|
ApoI, CfaI, FsiI, XapI | |
AcuI | 5534 | Acinetobacter calcoaceticus | 5' CTGAAG 3' GACTTC
|
5' ---CTGAAGN13NNN --- 3' 3' ---GACTTCN13N NN--- 5'
|
BspKT5I, Eco57I | |
AcvI | 5359 | Aeromonas caviae | 5' CACGTG 3' GTGCAC
|
5' ---CAC GTG--- 3' 3' ---GTG CAC--- 5'
|
BbrPI, BcoAI, Eco72I, PmaCI, PmlI, PspCI | |
AcyI [25] | 31 | Anabaena cylindrica | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AhaII, AosII, BbiII, BsaHI, BstACI, Hin1I, HgiI, Hsp92I, Msp17I | |
AdeI | 2991 | Alcaligenes denitrificans Ss 3-028 | 5' CACNNNGTG 3' GTGNNNCAC
|
5' ---CACNNN GTG--- 3' 3' ---GTG NNNCAC--- 5'
|
BstIZ316I, DraIII | |
AeuI | 33 | Achromobacter eurydice | 5' CCWGG 3' GGWCC
|
5' ---CC WGG--- 3' 3' ---GGW CC--- 5'
|
AglI, AjnI, BseBI, BstNI, BstOI, Bst2UI, EcoRII, SleI, SspAI | |
AfaI [26] | 37 | Acidiphilium facilis 28H | 5' GTAC 3' CATG
|
5' ---GT AC--- 3' 3' ---CA TG--- 5'
|
Csp6I, CviQI, CviRII, HpyBI, PabI, PlaAII, RsaI, RsaNI | |
Afa16RI | 34 | Acidiphilium sp. 16R | 5' CGATCG 3' GCTAGC
|
5' ---CGAT CG--- 3' 3' ---GC TAGC--- 5'
|
Afa22MI, BspCI, EagBI, MvrI, NblI, Ple19I, PvuI, Psu161I, RshI, XorII | |
Afa22MI | 35 | Acidocella facilis | 5' CGATCG 3' GCTAGC
|
5' ---CGAT CG--- 3' 3' ---GC TAGC--- 5'
|
Afa16RI, BspCI, EagBI, ErhB9I, NblI, Ple19I, Psu161I, PvuI, RshI | |
AfeI [27] | 2669 | Alcaligenes faecalis T2774 | 5' AGCGCT 3' TCGCGA
|
5' ---AGC GCT--- 3' 3' ---TCG CGA--- 5'
|
AitI, Aor51H, Eco47III, FunI | |
AfiI | 10489 | Anoxybacillus flavithermus | 5' CCN7GG 3' GGN7CC
|
5' ---CCNNNNN NNGG--- 3' 3' ---GGNN NNNNNCC--- 5'
|
Bsc4I, BseLI, BslI, BflI, Bsc107I, BsiYI, Bst22I | |
AflI [28] | Anabaena flos-aquae | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Asp745I, BamNI, BcuAI, CauI, Csp68KI, DsaIV, Eco47I, SinI | ||
AflII [28] [29] [30] | 39 | Anabaena flos-aquae | 5' CTTAAG 3' GAATTC
|
5' ---C TTAAG--- 3' 3' ---GAATT C--- 5'
|
BfrI, BspTI, Bst98I, BstAFI, BstPZ740I, Esp4I, MspCI, Vha464I | |
AflIII [28] [10] | 40 | Anabaena flos-aquae | 5' ACRYGT 3' TGYRCA
|
5' ---A CRYGT--- 3' 3' ---TGYRC A--- 5'
|
Asp90I | |
AgeI [11] [31] | 42 | Agrobacterium gelatinovorum | 5' ACCGGT 3' TGGCCA
|
5' ---A CCGGT--- 3' 3' ---TGGCC A--- 5'
|
AsiAI, AsiGI, BshTI, CsiAI, CspAI, PinAI | |
AglI [32] | 6652 | Arthrobacter globiformis | 5' CCWGG 3' GGWCC
|
5' ---CC WGG--- 3' 3' ---GGW CC--- 5'
|
AeuI, Bse16I, Bse17I, Bse24I, BshGI, EcoRII, SleI, SniI, SslI | |
AgsI | Agrococcus sp. 25 | 5' TTSAA 3' AASTT
|
5' ---TTS AA--- 3' 5' ---AA STT--- 3'
|
None as of 4 May 2019 | ||
AhaI | 45 | Alteromonas haloplanktis B8 | 5' CCSGG 3' GGSCC
|
5' ---CC SGG--- 3' 3' ---GGS CC--- 5'
|
AseII, BcnI, BpuMI, CauII, Eco1831I, EcoHI, HgiS22I, NciI | |
AhaII | Aphanothece halophytica | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AstWI, AsuIII, BsaHI, BstACI, Hin1I, HgiI, HgiDI, HgiHII, PamII | ||
AhaIII [14] [29] [30] [33] | Aphanothece halophytica | 5' TTTAAA 3' AAATTT
|
5' ---TTT AAA--- 3' 3' ---AAA TTT--- 5'
|
DraI, PauAII, SruI | ||
AhaB8I | Aphanothece halophytica B8 | 5' GGTACC 3' CCATGG
|
5' ---G GTACC--- 3' 3' ---CCATG G--- 5'
|
Acc65I, Asp718I, KpnI, SthI | ||
AhdI [34] [35] | Aeromonas hydrophila | 5' GACN5GTC 3' CTGN5CAG
|
5' ---GACNNN NNGTC--- 3' 3' ---CTGNN NNNCAG--- 5'
|
AspEI, BmeRI, BspOVI, DriI, Eam1105I, EclHKI, NruGI | ||
AhlI | 4838 | Alteromonas haloplanktis SP | 5' ACTAGT 3' TGATCA
|
5' ---A CTAGT--- 3' 3' ---TGATC A--- 5'
|
AclNI, BcuI, SpeI | |
AhyI | 49 | Aeromonas hydrophila | 5' CCCGGG 3' GGGCCC
|
5' ---C CCGGG--- 3' 3' ---GGGCC C--- 5'
|
Cfr9I, CfrJ4I, EaeAI, EclRI, PaeBI, SmaI, TspMI, XmaI, XmaCI | |
AitI | 54 | Aquaspirillum itersonii | 5' AGCGCT 3' TCGCGA
|
5' ---AGC GCT--- 3' 3' ---TCG CGA--- 5'
|
AfeI, Aor51H, Eco47III, FunI | |
AjiI | 10919 | Acinetobacter johnsonii RFL47 | 5' CACGTC 3' GTGCAG
|
5' ---CAC GTC--- 3' 3' ---GTG CAG--- 5'
|
BmgBI, BtrI | |
AjnI | 7185 | Acinetobacter johnsonii R2 | 5' CCWGG 3' GGWCC
|
5' --- CCWGG--- 3' 3' ---GGWCC --- 5'
|
AorI, ApaORI, ApyI, EcoRII, MvaI, Psp6I, PspGI, SleI, SspAI | |
AjoI | 2604 | Acinetobacter johnsonii 35 | 5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
ApiI, BloHII, BspMAI, CfrA4I, CfuII, PstI, SalPI, SflI, Srl5DI | |
AjuI | 7740 | Acinetobacter junii RFL46 | 5' GAAN7TTGG 3'CTTN7AACC
|
5' ---NNNNN NN6GAAN7TTGGN5NNNNNN --- 3' 3' --- NNNNNNN6CTTN7AACCN5N NNNNN--- 5'
|
None as of 28 Oct. 2020 | |
AleI | 5791 | Aureobacterium liquefaciens | 5' CACN4GTG 3' GTGN4CAC
|
5' ---CACNN NNGTG--- 3' 3' ---GTGNN NNCAC--- 5'
|
OliI | |
AlfI | 6110 | Acinetobacter lwoffii BH 32 | 5' GCAN6TGC 3' CGTN6ACG
|
5' ---GCAN6TGCN9NNN --- 3' 3' ---CGTN6ACGN9N NN--- 5'
|
None as of May 2010 | |
AliI | Acetobacter liquefaciens | 5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
AccEBI, BamHI, Bce751I, Bsp98I, BspAAIII, Nsp29132II, Pfl8I | ||
AliAJI | 59 | Acetobacter liquefaciens AJ 2881 | 5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
ApiI, Asp713I, BspMAI, CflI, CstI, MhaAI, PstI, SalPI, Sst12I, YenI | |
AloI [36] [37] | 2812 | Acinetobacter lwoffii Ks 4-8 | 5' GAACN6TCC 3' CTTGN6AGG
|
5' ---GAACN6TCCN6NNNNNN --- 3' 3' ---CTTGN6AGGN6N NNNNN--- 5'
|
None as of May 2010 | |
AluI [12] [14] [38] [39] [40] [41] | 61 | Arthrobacter luteus | 5' AGCT 3' TCGA
|
5' ---AG CT--- 3' 3' ---TC GA--- 5'
|
AluBI, MltI | |
AluBI | 16189 | Arthrobacter luteus B | 5' AGCT 3' TCGA
|
5' ---AG CT--- 3' 3' ---TC GA--- 5'
|
AluI, MltI | |
AlwI | 65 | Acinetobacter lwoffii | 5' GGATC 3' CCTAG
|
5' ---GGATCN3N N--- 3' 3' ---CCTAGN3NN --- 5'
|
AclWI, BinI, BspPI, BsrWI, BstH9I, BthII, Bth617I, EacI | |
Alw21I | Acinetobacter lwoffii RFL21 | 5' GWGCWC 3' CWCGWG
|
5' ---GWGCW C--- 3' 3' ---C WCGWG--- 5'
|
AspHI, Bbv12I, Bsh45I, BsiHKAI, Bsm6I, HgiAI, MspV281I | ||
Alw26I [42] | 63 | Acinetobacter lwoffii RFL26 | 5' GTCTC 3' CAGAG
|
5' ---GTCTCN NNNN--- 3' 3' ---CAGAGNNNNN --- 5'
|
BcoDI, BscQII, BsmAI, BsoMAI, BstMAI | |
Alw44I | Acinetobacter lwoffii RFL44 | 5' GTGCAC 3' CACGTG
|
5' ---G TGCAC--- 3' 3' ---CACGT G--- 5'
|
ApaLI, SnoI, VneI | ||
AlwNI [43] | Acinetobacter lwoffii N | 5' CAGNNNCTG 3' GTCNNNGAC
|
5' ---CAGNNN CTG--- 3' 3' ---GTC NNNGAC--- 5'
|
CaiI | ||
AlwXI | 67 | Acinetobacter lwoffii X | 5' GCAGC 3' CGTCG
|
5' ---GCAGCN7N NNNN--- 3' 3' ---CGTCGN7NNNNN --- 5'
|
BbvI, BseKI, BseXI, Bsp423I, Bst12I, Bst71I, BstV1I | |
Ama87I | Alteromonas macleodii 87 | 5' CYCGRG 3' GRGCYC
|
5' ---C YCGRG--- 3' 3' ---GRGCY C--- 5'
|
AquI, AvaI, BmeT110I, BsiHKCI, BsoBI, Eco88I, Nli3877I, NspSAI | ||
AmaCSI | 26714 | Arthrospira maxima CS-328 | 5' GCTCCA 3' CGAGGT
|
5' ---GCTCCAN8NNN --- 3' 3' ---CGAGGTN8N NN--- 5'
|
None as of 4 May 2018 | |
AocI | 74 | Anabaena sp. | 5' CCTNAGG 3' GGANTCC
|
5' ---CC TNAGG--- 3' 3' ---GGANT CC--- 5'
|
AyI, Bse21I, Bsu36I, Eco81I, Lmu60I, OaNI, MstII, SauI, SshAI | |
AocII | Anabaena sp. | 5' GDGCHC 3' CHCGDG
|
5' ---GDGCH C--- 3' 3' ---C HCGDG--- 5'
|
BmyI, BsoCI, Bsp1286I, BspLS2I, MhlI, NspII, SduI | ||
AorI | 77 | Acetobacter aceti orleanensis | 5' CCWGG 3' GGWCC
|
5' ---CC WGG--- 3' 3' ---GGW CC--- 5'
|
BseBI, BstNI, BstOI, Bst2UI, EcoRII, MvaI, Sth117I, Tai | |
Aor13HI [44] | Acidiphilium organovorum 13H | 5' TCCGGA 3' AGGCCT
|
5' ---T CCGGA--- 3' 3' ---AGGCC T--- 5'
|
AccIII, BbvAIII, BlfI, BseAI, BsiMI, BspEI, CauB3I, Kpn2I, MroI, PtaI | ||
Aor51HI [45] | 76 | Acidiphilium organovorum 51H | 5' AGCGCT 3' TCGCGA
|
5' ---AGC GCT--- 3' 3' ---TCG CGA--- 5'
|
AfeI, AitI, Eco47III, FunI | |
AosI | Anabaena oscillarioides | 5' TGCGCA 3' ACGCGT
|
5' ---TGC GCA--- 3' 3' ---ACG CGT--- 5'
|
Acc16I, AviII, FdiII, FspI, MstI, NsbI, PamI, Pun14627I | ||
AosII | Anabaena oscillarioides | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AstWI, BbiII, BsaHI, BstACI, Hin1I, HgiI, HgiGI, Msp17I, PamII | ||
ApaI [11] [30] [46] | Acetobacter pasteurianus pasteurianus | 5' GGGCCC 3' CCCGGG
|
5' ---GGGCC C--- 3' 3' ---C CCGGG--- 5'
|
Bsp120I, PpeI, PspOMI | ||
ApaBI [47] | Acetobacter pasteurianus B | 5' GCAN5TGC 3' CGTN5ACG
|
5' ---GCANNNNN TGC--- 3' 3' ---CGT NNNNNACG--- 5'
|
BstAPI | ||
ApaCI | Acetobacter pasteurianus C | 5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
AliI, BamHI, BnaI, Bsp4009I, BstI, NspSAIV, Pfl8I, SolI, SurI | ||
ApaLI [48] [49] | Acetobacter pasteurianus | 5' GTGCAC 3' CACGTG
|
5' ---G TGCAC--- 3' 3' ---CACGT G--- 5'
|
Alw44I, SnoI, VneI | ||
ApaORI | 86 | Acetobacter pasteurianus | 5' CCWGG 3' GGWCC
|
5' ---CC WGG--- 3' 3' ---GGW CC--- 5'
|
AjnI, BstNI, BstOI, Bst1I, Bst2I, Fsp1604I, MvaI, Psp6I, PspGI | |
ApeKI [50] | Aeropyrum pernix K1 | 5' GCWGC 3' CGWCG
|
5' ---G CWGC--- 3' 3' ---CGWC G--- 5'
|
AceI, SuiI, Taq52I, TseI | ||
ApiI | 2315 | Arthrobacter picolinophilus | 5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
Asp713I, Bsp63I, CfrA4I, PaePI, Pfl21I, Psp23I, PstI, SflI, Sst12I | |
ApoI [51] | Arthrobacter protophormiae | 5' RAATTY 3' YTTAAR
|
5' ---R AATTY--- 3' 3' ---YTTAA R--- 5'
|
AcsI, CfaI, FsiI, XapI, EcoRI | ||
AplI | 25962 | Arthrospira platensis NIES-39 | 5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
See this site for a complete list. | |
ApyI | 93 | Arthrobacter pyridinolis | 5' CCWGG 3' GGWCC
|
5' ---CC WGG--- 3' 3' ---GGW CC--- 5'
|
BciBII, BptI, BseBI, BstNI, BstOI, Bst2UI, Bst38I, Bst100I, MvaI | |
ApyPI | 14756 | Arcanobacterium pyogenes | 5' ATCGAC 3' TAGCTG
|
5' ---ATCGACN17NNN --- 3' 3' ---TAGCTGN17N NN--- 5'
|
None as of 4 August 2019 | |
AquI | Agmenellum quadruplicatum PR-6 | 5' CYCGRG 3' GRGCYC
|
5' ---C YCGRG--- 3' 3' ---GRGCY C--- 5'
|
BcoI, BmeT110I, BsmAI, BsoMAI, BsoBI, BstSI, Eco27kI, OfoI | ||
AquII | 20238 | Agmenellum quadruplicatum PR-6 | 5' GCCGNAC 3' CGGCNTG
|
5' ---GCCGNACN17NNN --- 3' 3' ---CGGCNTGN17N NN--- 5'
|
None as of 4 August 2019 | |
AquIII | 20239 | Agmenellum quadruplicatum PR-6 | 5' GAGGAG 3' CTCCTC
|
5' ---GAGGAGN17NNN --- 3' 3' ---CTCCTCN17N NN--- 5'
|
BseRI | |
AquIV | 20240 | Agmenellum quadruplicatum PR-6 | 5' GRGGAAG 3' CYCCTTC
|
5' ---GRGGAAGN16NNN --- 3' 3' ---CYCCTTCN16N NN--- 5'
|
None as of 4/9/19 | |
ArsI | 19405 | Arthrobacter sp. NTS | 5' GACN6TTYG 3' CTGN6AARC
|
5' ---NNNNN NN7GACN6TTYGN5NNNNNN --- 3' 3' --- NNNNNNN7CTGN6AARCN5N NNNNN--- 5'
|
None as of Oct. 28 2020 | |
AscI [11] [52] | Arthrobacter sp. | 5' GGCGCGCC 3' CCGCGCGG
|
5' ---GG CGCGCC--- 3' 3' ---CCGCGC GG--- 5'
|
PalAI, SgsI | ||
AseI [53] | 96 | Aquaspirillum serpens | 5' ATTAAT 3' TAATTA
|
5' ---AT TAAT--- 3' 3' ---TAAT TA--- 5'
|
AsnI, BpoAI, PshBI, Sru4DI, VspI | |
AseII [53] | 97 | Aquaspirillum serpens | 5' CCSGG 3' GGSCC
|
5' ---CC SGG--- 3' 3' ---GGS CC--- 5'
|
AhaI, AsuC2I, BcnI, CauII, EcoHI, HgiS22I, Kpn49kII, Mgl14481I, NciI | |
AsiI | Azotobacter sp. | 5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
ApaCI, BamHI, BnaI, Bsp4009I, BstI, OkrAI, Pfl8I, SurI, Uba4009I | ||
AsiAI | 2853 | Arthrobacter sp. A7359 | 5' ACCGGT 3' TGGCCA
|
5' ---A CCGGT--- 3' 3' ---TGGCC A--- 5'
|
AgeI, AsiGI, BshTI, CsiAI, CspAI, PinAI | |
AsiGI | 10828 | Arthrobacter sp. G | 5' ACCGGT 3' TGGCCA
|
5' ---A CCGGT--- 3' 3' ---TGGCC A--- 5'
|
AgeI, AsiAI, BshTI, CsiAI, CspAI, PinAI | |
AsiSI | Arthrobacter sp. | 5' GCGATCGC 3' CGCTAGCG
|
5' ---GCGAT CGC--- 3' 3' ---CGC TAGCG--- 5'
|
RgaI, SfaAI, , SgfI | ||
Asi256I | 18472 | Arthrobacter sp. Ck256 | 5' GATC 3' CTAG
|
5' ---G ATC--- 3' 3' ---CTA G--- 5'
|
See this site for a complete list. | |
Asi372I | 15803 | Arthrobacter sp. Mn372 | 5' ATGCAT 3' TACGTA
|
5' ---ATGCA T--- 3' 3' ---T ACGTA--- 5'
|
Ppu10I, EcoT22I, Mph1103I, NsiI, Zsp2I, BfrBI, Csp68KIII, PinBI, SepI, SspD5II | |
AsnI [54] | 98 | Arthrobacter sp. N-CM | 5' ATTAAT 3' TAATTA
|
5' ---AT TAAT--- 3' 3' ---TAAT TA--- 5'
|
AseI, BpoAI, PshBI, Sru4DI, VspI | |
AspI [55] | Achromobacter sp. 699 | 5' GACNNNGTC 3' CTGNNNCAG
|
5' ---GACN NNGTC--- 3' 3' ---CTGNN NCAG--- 5'
|
AtsI, PflFI, PsyI, TelI, Tth111I | ||
Asp10HI | Acidiphilium sp. 10H | 5' TTCGAA 3' AAGCTT
|
5' ---TT CGAA--- 3' 3' ---AAGC TT--- 5'
|
AsuII, BspT104I, BstBI, CbiI, Csp68KII, PlaII, PpaAI, Ssp1I | ||
Asp10HII | 100 | Acidiphilium sp. 10H | 5' CCAN5TGG 3' GGTN5ACC
|
5' ---CCANNNN NTGG--- 3' 3' ---GGTN NNNNACC--- 5'
|
AccB7I, AcpII, BasI, Esp1396I, PflBI, PflMI, Van91I | |
Asp26HI | 111 | Acidiphilium sp. 26H | 5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp27HI, Asp35HI, Asp36HI, BsaMI, BscCI, BsmI, PctI | |
Asp27HI | 112 | Acidiphilium sp. 27H | 5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp35HI, Asp36HI, Asp40HI, BmaHI, BsaMI, BscCI, BsmI | |
Asp35HI | 117 | Acidiphilium sp. 35H | 5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp36HI, Asp40HI, Asp50HI, BsaMI, BscCI, BsmI, Mva1269I | |
Asp36HI | 118 | Acidiphilium sp. 36H | 5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp40HI, Asp50HI, BmaHI, BscCI, BsmI, Mva1269I, PctI | |
Asp40HI | 120 | Acidiphilium sp. 40H | 5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp27HI, Asp36HI, Asp50HI, BsaMI, BscCI, BsmI, Mva1269I | |
Asp50HI | 122 | Acidiphilium sp. 50H | 5' GAATGC 3' CTTACG
|
5' ---GAATGCN --- 3' 3' ---CTTAC GN--- 5'
|
Asp26HI, Asp35HI, Asp36HI, BsaMI, BscCI, BsmI, Mva1269I | |
Asp700I [56] | Achromobacter sp. 700 | 5' GAAN4TTC 3' CTTN4AAG
|
5' ---GAANN NNTTC--- 3' 3' ---CTTNN NNAAG--- 5'
|
BbvAI, MroXI, PdmI, XmnI | ||
Asp713I | 131 | Achromobacter sp. 713 | 5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
AjoI, AliAJI, BloHII, CfrA4I, Ecl37kI, MhaAI, PstI, SflI, Srl5DI, YenI | |
Asp718I [57] | Achromobacter sp. 718 | 5' GGTACC 3' CCATGG
|
5' ---G GTACC--- 3' 3' ---CCATG G--- 5'
|
Acc65I, AhaB8I, KpnI, SthI | ||
Asp745I | Achromobacter sp. 745 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme18I, BsrAI, CauI, Eco47I, ErpI, FdiI, SinI, VpaK11AI, VpaK11BI | ||
AspAI | Alcaligenes sp. | 5' GGTNACC 3' CCANTGG
|
5' ---G GTNACC--- 3' 3' ---CCANTG G--- 5'
|
AcrII, Bse64I, BseT10I, BstEII, BstPI, Eco91I, EcoO65I, PspEI | ||
AspA2I | 6959 | Arthrobacter sp. A2 | 5' CCTAGG 3' GGATCC
|
5' ---C CTAGG--- 3' 3' ---GGATC C--- 5'
|
AvrBII, AvrII, BlnI, BspA2I, XmaJI | |
AspEI [58] | Aureobacterium sp. | 5' GACN5GTC 3' CTGN5CAG
|
5' ---GACNNN NNGTC--- 3' 3' ---CTGNN NNNCAG--- 5'
|
AhdI, BmeRI, BspOVI, DriI, Eam1105I, EclHKI, NruGI | ||
AspHI [59] | Achromobacter sp. H | 5' GWGCWC 3' CWCGWG
|
5' ---GWGCW C--- 3' 3' ---C WCGWG--- 5'
|
Alw21I, Bbv12I, Bsh45I, BsiHKAI, Bsm6I, HgiAI, MspV281I | ||
AspLEI | Arthrobacter sp. LE3860 | 5' GCGC 3' CGCG
|
5' ---GCG C--- 3' 3' ---C GCG--- 5'
|
BspLAI, BstHHI, CfoI, FnuDIII, HhaI, Hin6I, HinP1I, HsoI, HspAI, SciNI | ||
AspMI | 2977 | Acinetobacter sp. M | 5' AGGCCT 3' TCCGGA
|
5' ---AGG CCT--- 3' 3' ---TCC GGA--- 5'
|
AatI, Eco147I, GdiI, PceI, SarI, Sru30DI, SseBI, SteI, StuI | |
AspMDI | Alcaligenes sp. MD1 | 5' GATC 3' CTAG
|
5' --- GATC--- 3' 3' ---CTAG --- 5'
|
BfuCI, Bsp143I, BstMBI, DpnII, Kzo9I, MboI, NdeII, Sau3AI | ||
AspNI | Anabaena sp. J3 | 5' GGNNCC 3' CCNNGG
|
5' ---GGN NCC--- 3' 3' ---CCN NGG--- 5'
|
BmiI, BscBI, BspLI, NlaIV, PspN4I | ||
AspS9I | Arthrobacter sp. S9 | 5' GGNCC 3' CCNGG
|
5' ---G GNCC--- 3' 3' ---CCNG G--- 5'
|
AsuI, AvcI, Bac36I, Bal228I, FmuI, NspIV, PspPI, Sau96I | ||
AssI | 4930 | Arthrobacter sp. | 5' AGTACT 3' TCATGA
|
5' ---AGT ACT--- 3' 3' ---TCA TGA--- 5'
|
Acc113I, BmcAI, Bpa34I, DpaI, Eco255I, RflFII, ScaI, ZrmI | |
AstWI | Anabaena sp. | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AsuIII, BsaHI, BstACI, Hin1I, HgiI, HgiDI, HgiGI, Msp17I | ||
AsuI [60] | Anabaena subcylindrica | 5' GGNCC 3' CCNGG
|
5' ---G GNCC--- 3' 3' ---CCNG G--- 5'
|
AspS9I, AvcI, CcuI, Cfr13I, FmuI, MaeK81II, Nsp7121I, PspPI, UnbI | ||
AsuII [61] | Anabaena subcylindrica | 5' TTCGAA 3' AAGCTT
|
5' ---TT CGAA--- 3' 3' ---AAGC TT--- 5'
|
AcpI, Bpu14I, Bsp119I, BspT104I, Csp45I, FspII, LspI, NspV, SfuI | ||
AsuIII | Anabaena subcylindrica | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AsuIII, BbiII, BsaHI, BstACI, Hin1I, HgiHII, Hsp92I, Msp17I | ||
AsuC2I | 2901 | Actinobacillus suis C2 | 5' CCSGG 3' GGSCC
|
5' ---CC SGG--- 3' 3' ---GGS CC--- 5'
|
AhaI, AseII, BcnI, Eco1831I, EcoHI, Kpn49kII, Mgl14481I, NciI | |
AsuHPI [62] | 2811 | Actinobacillus suis HP | 5' GGTGA 3' CCACT
|
5' ---GGTGAN6NN --- 3' 3' ---CCACTN6N N--- 5'
|
HphI, SspD5I | |
AsuNHI [62] | Actinobacillus suis NH | 5' GCTAGC 3' CGATCG
|
5' ---G CTAGC--- 3' 3' ---CGATC G--- 5'
|
AceII, BmtI, BspOI, LlaG2I, NheI, PstNHI | ||
AtsI | Aureobacterium testaceum 4842 | 5' GACNNNGTC 3' CTGNNNCAG
|
5' ---GACN NNGTC--- 3' 3' ---CTGNN NCAG--- 5'
|
AspI, PflFI, PsyI, TelI, Tth111I | ||
AvaI [14] [63] [64] | Anabaena variabilis | 5' CYCGRG 3' GRGCYC
|
5' ---C YCGRG--- 3' 3' ---GRGCY C--- 5'
|
AquI, Ama87I, BsiHKCI, BsoBI, BspLU4I, Eco88I, NspIII, PlaAI | ||
AvaII [12] [14] [41] [63] [64] | Anabaena variabilis | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme18I, Bme216I, BsrAI, Eco47I, Kzo49I, Psp03I, SmuEI, VpaK11AI | ||
AvcI | Actinomyces violaceoniger cristalomycini | 5' GGNCC 3' CCNGG
|
5' ---G GNCC--- 3' 3' ---CCNG G--- 5'
|
AspS9I, BshKI, BsiZI, Bsp1894I, BspBII, BspF4I, Bsu54I, Pde12I | ||
AviII | Anabaena variabillis (halle) | 5' TGCGCA 3' ACGCGT
|
5' ---TGC GCA--- 3' 3' ---ACG CGT--- 5'
|
Acc16I, AosI, FdiII, FspI, MstI, NsbI, PamI, Pun14627I | ||
AvrII [11] [29] | 173 | Anabaena variabilis UW | 5' CCTAGG 3' GGATCC
|
5' ---C CTAGG--- 3' 3' ---GGATC C--- 5'
|
AspA2I, AvrBII, BlnI, BspA2I, XmaJI | |
AvrBII | 171 | Arthrobacter variabilis | 5' CCTAGG 3' GGATCC
|
5' ---C CTAGG--- 3' 3' ---GGATC C--- 5'
|
AspA2I, AvrII, BlnI, BspA2I, XmaJI | |
AxyI [65] | 174 | Acetobacter xylinus | 5' CCTNAGG 3' GGANTCC
|
5' ---CC TNAGG--- 3' 3' ---GGANT CC--- 5'
|
AocI, BliHKI, Bse21I, BspR7I, Bsu36I, CvnI, Eco81I, Lmu60I |
§ An HF version of this enzyme is available