From Wikipedia, the free encyclopedia
Plant ontology (PO) is a collection of
ontologies developed by the Plant Ontology Consortium. These ontologies describe anatomical structures and growth and developmental stages across
Viridiplantae.
[2]
[3]
[4]
[5]
[6]
[7] The PO is intended for multiple applications, including
genetics,
genomics,
phenomics, and
development,
taxonomy and
systematics,
semantic applications and education.
[1]
[8]
- ^
a
b Walls, R. L.; Athreya, B.; Cooper, L.; Elser, J.; Gandolfo, M. A.; Jaiswal, P.; Mungall, C. J.; Preece, J.; Rensing, S.; Smith, B.; Stevenson, D. W. (2012).
"Ontologies as integrative tools for plant science". American Journal of Botany. 99 (8): 1263–1275.
doi:
10.3732/ajb.1200222.
PMC
3492881.
PMID
22847540.
- ^
a
b The Plant Ontology Consortium, C. (2002).
"The Plant Ontology™ Consortium and Plant Ontologies". Comparative and Functional Genomics. 3 (2): 137–142.
doi:
10.1002/cfg.154.
PMC
2447263.
PMID
18628842.
-
^ Ilic, Katica (2008). Albert, Burger (ed.).
Plant Structure Ontology (PSO) - A morphological and anatomical ontology of flowering plants. Springer. pp. 27–42. Retrieved August 22, 2012.
-
^ Avraham, S.; Tung, C. -W.; Ilic, K.; Jaiswal, P.; Kellogg, E. A.;
McCouch, S.; Pujar, A.; Reiser, L.; Rhee, S. Y.; Sachs, M. M.; Schaeffer, M.; Stein, L.; Stevens, P.; Vincent, L.; Zapata, F.; Ware, D. (2007).
"The Plant Ontology Database: A community resource for plant structure and developmental stages controlled vocabulary and annotations". Nucleic Acids Research. 36 (Database issue): D449–D454.
doi:
10.1093/nar/gkm908.
PMC
2238838.
PMID
18194960.
-
^ Ilic, K.; Kellogg, E. A.; Jaiswal, P.; Zapata, F.; Stevens, P. F.; Vincent, L. P.; Avraham, S.; Reiser, L.; Pujar, A.; Sachs, M. M.; Whitman, N. T.; McCouch, S. R.; Schaeffer, M. L.; Ware, D. H.; Stein, L. D.; Rhee, S. Y. (2006).
"The Plant Structure Ontology, a Unified Vocabulary of Anatomy and Morphology of a Flowering Plant". Plant Physiology. 143 (2): 587–599.
doi:
10.1104/pp.106.092825.
PMC
1803752.
PMID
17142475.
-
^ Pujar, A.; Jaiswal, P.; Kellogg, E. A.; Ilic, K.; Vincent, L.; Avraham, S.; Stevens, P.; Zapata, F.; Reiser, L.; Rhee, S. Y.; Sachs, M. M.; Schaeffer, M.; Stein, L.; Ware, D.; McCouch, S. (2006).
"Whole-Plant Growth Stage Ontology for Angiosperms and Its Application in Plant Biology". Plant Physiology. 142 (2): 414–428.
doi:
10.1104/pp.106.085720.
PMC
1586063.
PMID
16905665.
-
^ Jaiswal, P.; Avraham, S.; Ilic, K.; Kellogg, E. A.; McCouch, S.; Pujar, A.; Reiser, L.; Rhee, S. Y.; Sachs, M. M.; Schaeffer, M.; Stein, L.; Stevens, P.; Vincent, L.; Ware, D.; Zapata, F. (2005).
"Plant Ontology (PO): A Controlled Vocabulary of Plant Structures and Growth Stages". Comparative and Functional Genomics. 6 (7–8): 388–397.
doi:
10.1002/cfg.496.
PMC
2447502.
PMID
18629207.
-
^
"Information Overload in the Era of 'Big Data'". Science Daily. Retrieved 23 August 2012.